ytjP [2019-06-26 11:06:54]

similar to metallopeptidase

locus: BSU29980

pI: 4.66

mw: 50.89 kDa

protein length: 463 aa

gene length: 1392 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 3,067,420 3,068,811

The protein

Protein family

• peptidase M20A family (according to Swiss-Prot)

Structure

• [PDB|3KHX] (from Staphylococcus aureus, 42% identity) [pubmed|20610394]

Expression and Regulation

Operons

• genes: [gene|44257D0FE03E3BC5B160BE70810EADFE3DA2C4F7|ytjP]
  description: [Pubmed|9387221]

Biological materials

Mutant

• MGNA-A820 (ytjP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/820 NBRP B. subtilis, Japan]
• BKE29980 ([gene|44257D0FE03E3BC5B160BE70810EADFE3DA2C4F7|ytjP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATGATCCCCTTTCCGC, downstream forward: _UP4_TAAAAGGACCGGCTTCTGCT
• BKK29980 ([gene|44257D0FE03E3BC5B160BE70810EADFE3DA2C4F7|ytjP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATGATCCCCTTTCCGC, downstream forward: _UP4_TAAAAGGACCGGCTTCTGCT

References

• 16479537,9387221,20610394